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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864845.1_cds_XP_016516125.1_28400
CDS Infomation

[gene=LOC107832765] [db_xref=GeneID:107832765] [protein=pectate lyase-like] [protein_id=XP_016516125.1] [location=complement(join(89081..89390,89492..90068,90208..90511))] [gbkey=CDS]
Sequence

ATGGGAATCTCAAAAACAAAAATCAATGGGCTTATTGTCCTCTTATTCTTCACATTTGTC
GCAGTAGGAATAGCAGTGCCAGACAACAGCACAAGAAGGCACTTGTCCAAAAAATACAAA
GGACCATGTGTTGCTGCAAATCTTATTGACAAATGCTGGAGATGTAACCCTCGTTGGGCT
GATGATCGCCAAAAATATGCTGATTGTGCTATGGGTTTTGGCCGTAATGCTATTGGAGGA
AAAGGTGGAAGGATTTATGTAGTCACAGATCCTTCTGACTACAACGTCGAAAATCCCGTG
CCAGGTACCCTAAGGCACGCAGTGATCCAGAAGGAACCTTTGTGGATCATATTCTCAAAA
CATATGAAAATTAAGTTGAACAGGGAACTGCTTATGCAAAGCTACAAAACCATTGATGCA
CGTGGACACAATGTCCATATTGAAAAAGGAGCTGGAATTAAGATGCAAGGTGTAAATAAC
ATTATCATCACTAATCTTCACATTCACAACATCGGTCCTTCTTCTGGTGGCATGATCAGG
GACTCAATAGACCACATAGGTATCAGGGGTGCAGATGAAGGAGATGCTATTAGCATCTTC
GCTTCTCATGATATTTGGATCGACCACGTGTCGATGTCACGTGCCGCGGATGGGCTCATT
GACGCCGTCCAAGGATCTACTGGTATTACTATCTCCAATTGCCACTTTACTGACCACGAT
AAAGTAATGTTGTTTGGTGCAAATGATAATTACCTCGACGATAAGAAAATGCAAATCACA
TTAGCGTACAACCACTTTGGTAAGAGGTTGGATCAAAGGATGCCAAGGTGCAGGCTTGGA
TTCTTCCATCTTGTCAACAACGATTACACTCATTGGATGAGGTACGCCATTGGCGGCAGC
AGTGAGGCTACCATCATTAGCCAGGGTAATCGTTTTATTGCTCAACACAATGTTGATATT
AAAGAGGTGACACACAGGGAAAAGGCACAAGAATCAGAATGGAGACACTGGACTTGGTTA
TCACAAGATGATGATATGCAAAATGGTGCTTTCTTTAGAACTTCTGGAGATCCAAATGCA
CTCAGCAAATTTAAGAACCTTAATTTGATGCCAGCAGAACCATCTTACAGAGTTGGAATT
CTTACTAAGTTTTCAGGATCACTCGGTTGCACAGTAGGACGCCCATGCTAG

Peptide Sequence

PEP ID

XP_016516125.1
PEP Infomation

PREDICTED: pectate lyase-like [Nicotiana tabacum]
Sequence

MGISKTKINGLIVLLFFTFVAVGIAVPDNSTRRHLSKKYKGPCVAANLIDKCWRCNPRWA
DDRQKYADCAMGFGRNAIGGKGGRIYVVTDPSDYNVENPVPGTLRHAVIQKEPLWIIFSK
HMKIKLNRELLMQSYKTIDARGHNVHIEKGAGIKMQGVNNIIITNLHIHNIGPSSGGMIR
DSIDHIGIRGADEGDAISIFASHDIWIDHVSMSRAADGLIDAVQGSTGITISNCHFTDHD
KVMLFGANDNYLDDKKMQITLAYNHFGKRLDQRMPRCRLGFFHLVNNDYTHWMRYAIGGS
SEATIISQGNRFIAQHNVDIKEVTHREKAQESEWRHWTWLSQDDDMQNGAFFRTSGDPNA
LSKFKNLNLMPAEPSYRVGILTKFSGSLGCTVGRPC

Transcript Sequence

Gene sequence data has not been registered.